Bioinformatics Engineer

Desired Qualifications:

• Graduate degree (Ph.D or M.S) that emphasizes bio/medical informatics, engineering, computer science, and statistics are preferred.

• Domain expertise in analysis and running pipelines and bioinformatic tools for at least one of the following ‘omes: genomics, transcriptomics, metabolomics, atac-seq, proteomics.

• Proficiency in Python and/or R and Linux bash scripting.

• Experience with pipeline languages like WDL, or Snakemake, or Nextflow.

• Proven track record of data and infrastructure management in a HPC (High Performance Computing) cluster or cloud computing like Google Cloud Platform or AWS.

• Experience with container systems, such as setting up virtual machines and docker instances.

• Experience and knowledge of code management, such as github.

• Experience in systems biology approaches for data integration is a plus. 

• Experience in developing tools and statistical methods for large-scale data analysis is a plus.

• Biological domain knowledge (rare disease) is a plus.

• Experience in bioinformatics and/or software development team-based projects.

• Willingness to work in a highly collaborative environment. Experience as part of a large NIH consortium is a plus.

• Ability to quickly adapt and learn the latest tools and skills.

• Strong communication skills (e.g., put together reports and presentations).

• Ability to work independently (e.g., find papers relevant to the subject, assess methods, implement methods, and apply them to datasets to reproduce results).

Education & Experience (Required):

• Bachelor's degree and three years of relevant experience or combination of education and relevant experience. Experience in a quantitative discipline such as economics, finance, statistics, or engineering.

Knowledge, Skills, and Abilities (Required):

• Substantial experience with MS Office and analytical programs.

• Excellent writing and analytical skills.

• Ability to prioritize workload.

Physical Requirements*:

• Sitting in place at a computer for long periods of time with extensive keyboarding/dexterity.

• Occasionally use a telephone.

• Rarely write by hand.

* - Consistent with its obligations under the law, the University will provide reasonable accommodation to any employee with a disability who requires accommodation to perform the essential functions of his or her job.

The expected pay range for this position is $108,002 to $128,138 per annum.
Stanford University provides pay ranges representing its good faith estimate of what the university reasonably expects to pay for a position. The pay offered to a selected candidate will be determined based on factors such as (but not limited to) the scope and responsibilities of the position, the qualifications of the selected candidate, departmental budget availability, internal equity, geographic location and external market pay for comparable jobs.

At Stanford University, base pay represents only one aspect of the comprehensive rewards package. The Cardinal at Work website (https://cardinalatwork.stanford.edu/benefits-rewards) provides detailed information on Stanford’s extensive range of benefits and rewards offered to employees. Specifics about the rewards package for this position may be discussed during the hiring process.

Why Stanford is for You
 
Imagine a world without search engines or social platforms. Consider lives saved through first-ever organ transplants and research to cure illnesses. Stanford University has revolutionized the way we live and enrich the world. Supporting this mission is our diverse and dedicated 17,000 staff. We seek talent driven to impact the future of our legacy. Our culture and unique perks empower you with:

• Freedom to grow. We offer career development programs, tuition reimbursement, or course auditing. Join a TedTalk, film screening, or listen to a renowned author or global leader speak.

• A caring culture. We provide superb retirement plans, generous time-off, and family care resources.

• A healthier you. Climb our rock wall or choose from hundreds of health or fitness classes at our world-class exercise facilities. We also provide excellent health care benefits.

• Discovery and fun. Stroll through historic sculptures, trails, and museums.

• Enviable resources. Enjoy free commuter programs, ridesharing incentives, discounts, and more

The job duties listed are typical examples of work performed by positions in this job classification and are not designed to contain or be interpreted as a comprehensive inventory of all duties, tasks, and responsibilities. Specific duties and responsibilities may vary depending on department or program needs without changing the general nature and scope of the job or level of responsibility. Employees may also perform other duties as assigned.
 
Consistent with its obligations under the law, the university will provide reasonable accommodation to any employee with a disability who requires accommodation to perform the essential functions of his or her job.
 
Stanford is an equal employment opportunity and affirmative action employer. All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, disability, protected veteran status, or any other characteristic protected by law.